######################### ## Data ## ######################### # # Directory 'Data' does not hold any data # but subdirectories give an indication # how the data has to be organized. # Data can be read and stored using scripts from # directory 'load_and_organize_data'. # ######################### ######################### ## Scripts ## ######################### # # # load_and_organize_data access and store data and convert data into suitable format ######################### # data.R Have a look at script 'data.R'! It holds all relevant information for loading the data. # read.DEM.R ... contains function read.DEM() for reading DEM data # long.DEM.R ... contains function long.DEM() for converting DEM data to long format # read.AirBase.R reading AirBase data # long.AirBase.R converting AirBase data ######################### # # # helper_functions R scripts with helper functions (source('helper_foo.R')) ######################### # helper_settings.R for A-settings_and_data.R (and follow-up) # helper_prelim.R ... B-preliminary_data_analysis.R # helper_out.R ... C-outlier_detection.R # helper_break.R ... D-break_detection.R ######################### # # ---------- # (External) R Scripts | R code | : splitted into chunks that can be called from knitr within .Rnw files (-> Report) ######################### ---------- # A-settings_and_data.R Script with settings (like specifying sources, libraries, knitr specific settings) and call for loading data # B-preliminary_data_analysis.R ... chunks for preliminary data analysis as in 4-Preliminaries.Rnw # C-outlier_detection.R ... chunks for outlier detection as in 5-Outlier.Rnw # D-break_detection.R ... chunks for break detection as in 6-Break.Rnw # E-compile_reports.R Script for compiling report '0-tech_rep.Rnw' or parts of it ######################### # # # Report The technical report ######################### # 0-tech_rep.Rnw main document, # tex/1-Titlepage.tex containing split up .tex documents for text only chapters # tex/2-Summary.tex # tex/3-Introduction.tex # 4-Preliminaries.Rnw and .Rnw child documents (containing both tex and R) # 5-Outlier.Rnw # 6-Break.Rnw # tex/7-Discussion.tex # 8-Appendix.Rnw # tex/References.bib bibliography ######################### # # # extracted R code from the report ######################### # 0-tech_rep.R # 4-Preliminaries.R # 5-Outlier.R # 6-Break.R # 8-Appendix.R ######################### # # ######################### ######################### ## cache and figures ## ######################### # # Directories 'cache' and 'figures' # hold the respective files for the current version of the report. # ######################### ############################################## ## sessionInfo() ############################################## ## ## R version 2.15.2 (2012-10-26) ## Platform: i386-w64-mingw32/i386 (32-bit) ## ## locale: ## [1] LC_COLLATE=German_Germany.1252 LC_CTYPE=German_Germany.1252 LC_MONETARY=German_Germany.1252 ## [4] LC_NUMERIC=C LC_TIME=German_Germany.1252 ## ## attached base packages: ## [1] splines stats graphics grDevices utils datasets methods base ## ## other attached packages: ## [1] kza_2.03 polynom_1.3-6 caTools_1.13 bitops_1.0-4.1 zoo_1.7-7 ## [6] latticeExtra_0.6-24 RColorBrewer_1.0-5 lattice_0.20-10 Hmisc_3.10-1 survival_2.36-14 ## [11] knitr_0.7.5 ## ## loaded via a namespace (and not attached): ## [1] cluster_1.14.3 digest_0.5.2 evaluate_0.4.2 formatR_0.6 grid_2.15.2 plyr_1.7.1 stringr_0.6.1 ## [8] tools_2.15.2 ## ##############################################